Table of Contents

• HOME

• Document Objectives

  • About This Document

  • Prerequisites

  • Training Material

• DocSeries

Computational Workflows

• Workflow Systems

  • Workflow Design

  • Workloads

  • Workflow Types

• Workflow Architecture

• Execution Strategies

  • Execution Strategy Matrix

SLURM Jobs

• SLURM Jobs

• How to Run a SLURM Job

  • Job Inputs

  • SLURM-Job Output

• SLURM-Job Workflow

• Resources & Runtime

  • Login vs Execution Nodes

• Job Scheduling

• Ranks in MPI Jobs

• PyLauncher

  • Common Mistakes

• Job Arrays vs Launcher

  • Parameter Sweeps

  • Python JobArray def

  • Python Launcher def

Tapis

• Scaling Jobs with Tapis

• Tapis Overview

• Interfacing with Tapis

• Tapis Jobs

  • SLURM and Tapis

  • Tapis as Automation

Tapis Apps

• Tapis Apps

  • Tapis-App Glossary

• Tapis-App Types

  • Execution Flows

  • What Is Apptainer?

• Run a Tapis App

  • Job Execution Details

• Tapis-Job Profiling

• Anatomy of a Tapis App

  • app.json Schema

    • Job Attrib. vs App Param.

    • app.json vs profile.json

  • App Files

    • Sample App Files

  • Scheduler Profile

    • Scheduler vs. envVariables

• Custom Tapis Apps

  • Tapis App Templates

  • MPI in Tapis Apps

  • HPC Launchers

  • Best Practices

DesignSafe Tapis Apps

• DesignSafe Tapis Apps

  • OpenSees Apps

  • OpenFOAM app

  • ADCIRC app

  • Compare Apps

• designsafe-agnostic-app

  • AgnosticApp - Input Arguments

  • AgnosticApp - Quick Reference

  • AgnosticApp - How to Choose Inputs

Training Modules

• tapis_train_setup

  • Tapis Authentication _{📂 Open in JupyterHub}

  • System Specifications _{📂 Open in JupyterHub}

  • Establish TMS Credentials _{📂 Open in JupyterHub}

  • Tapis Paths _{📂 Open in JupyterHub}

• Query and Retrieve Jobs

  • Step 1: Explore All Jobs _{📂 Open in JupyterHub}

    • Explore All Jobs _{📂 Open in JupyterHub}

    • Filter Tapis Jobs _{📂 Open in JupyterHub}

  • Step 2: Inspect Job _{📂 Open in JupyterHub}

    • Job Status _{📂 Open in JupyterHub}

    • Job Metadata _{📂 Open in JupyterHub}

    • Job History _{📂 Open in JupyterHub}

  • Step 3: Retrieve Output _{📂 Open in JupyterHub}

    • Access Output Data _{📂 Open in JupyterHub}

    • List All Job Output _{📂 Open in JupyterHub}

    • Download All Job Output _{📂 Open in JupyterHub}

    • Explore Jobs Interactively _{📂 Open in JupyterHub}

  • Cancel Tapis Job

• Explore Tapis Apps

  • List Tapis Apps _{📂 Open in JupyterHub}

  • Get Tapis App Schema _{📂 Open in JupyterHub}

  • designsafe-agnostic-app _{📂 Open in JupyterHub}

• Run DS Agnostic App

  • Machine-Learning Example _{📂 Open in JupyterHub}

• Creating a Custom Tapis App

  • Custom App: opensees-mp-s3-clone _{📂 Open in JupyterHub}

  • Build A Custom Tapis App _{📂 Open in JupyterHub}

TOC

Document Series

DesignSafe